New algebraic and combinatorial opportunities in the study of phylogenetic trees and networks.
MSI Colloquium, where the school comes together for afternoon tea before one speaker gives an accessible talk on their subject
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Description
Abstract:
Persi Diaconis and Susan Holmes showed in 1998 that binary phylogenetic trees on $n$ leaves can be encoded by matchings on a set of $2n-2$ elements, that is, a partition of the set into pairs. In this talk I will describe how this can be extended to correspondences for non-binary phylogenetic trees and forests, and for phylogenetic networks. For instance, the set of phylogenetic forests is in bijection with the set of all partitions of finite sets, and a large class of networks (the ``labellable'' networks) is in bijection with the set of ``expanding'' covers of finite sets. In some cases, these set-theoretic correspondences align with Brauer and partition diagrams, which have a monoid structure, and can even give rise to a product on tree-space via the ``sandwich semigroup'', posing some interesting possible lines of inquiry. Joint work with Peter Jarvis (Tasmania), Mike Steel (Canterbury), and Daniele Marchei (Camerino).
Afternoon tea will be provided at 3:30pm
Location
Seminar Room 1.33, Building 145, Science Road, ANU